Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
CESC rs525617 chr17:72890457 G/C 2.16E-5 299 15.33 27.9 21.2 KM Plot
CESC rs529286 chr17:72884294 T/C 1.37E-5 292 16.87 28.3 21.2 KM Plot
CESC rs538216 chr17:72888126 T/G 2.16E-5 299 15.33 27.9 21.2 KM Plot
CESC rs540555 chr11:125486848 T/C 8.1E-6 295 11.6 25.33 21.33 KM Plot
CESC rs540723 chr11:125489621 A/G 8.1E-6 295 11.6 25.33 21.33 KM Plot
CESC rs540725 chr17:72888345 A/G 1.62E-5 299 16.87 27.77 21.2 KM Plot
CESC rs543389 chr11:125464841 A/G 4.75E-6 287 11.67 27.8 21.13 KM Plot
CESC rs548181 chr11:125461709 A/G 4.62E-6 291 11.67 27.5 21.1 KM Plot
CESC rs550347 chr17:72890837 C/T 1.85E-5 295 16.87 27.63 21.2 KM Plot
CESC rs552136 chr17:72891023 G/A 2.46E-5 295 15.33 27.77 21.2 KM Plot
CESC rs554047 chr11:125518245 T/A 1.13E-5 293 11.6 26.5 21.13 KM Plot
CESC rs55704863 chr3:129165000 A/G 4.75E-5 295 21.47 20.95 14.73 KM Plot
CESC rs55708833 chr3:129239622 G/T 4.71E-5 295 21.73 20.63 14.73 KM Plot
CESC rs55728317 chr3:129220891 G/A 4.8E-5 295 21.47 20.63 14.73 KM Plot
CESC rs55737640 chr4:84360605 C/A 0 289 21.15 29.48 1.73 KM Plot